BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D09SP1|AL429219
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1637 1229 0.0
>3x_Contig1637
Length = 14855
Score = 1229 bits (617), Expect = 0.0
Identities = 651/661 (98%), Gaps = 2/661 (0%)
Strand = Plus / Plus
Query: 237 agcccgtctccactctaatattcgaatcgtgaaaaaccgttgattttgacccctctcttc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 agcccgtctccactctaatattcgaatcgtgaaaaaccgttgattttgacccctctcttc 63
Query: 297 caaatcgaaaaaaagtaagcagcggagaaaataagacactctctcattgaaagaattcaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 caaatcgaaaaaaagtaagcagcggagaaaataagacactctctcattgaaagaattcaa 123
Query: 357 ttgttcaaacctgttttcacatacacatatataaaggattgtgtgttcacaattggkgca 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 124 ttgttcaaacctgttttcacatacacatatataaaggattgtgtgttcacaattggtgca 183
Query: 417 actkggtgggctagatggcatcttcgatcagtgctgcaaaaactgacaattgtggtactg 476
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acttggtgggctagatggcatcttcgatcagtgctgcaaaaactgacaattgtggtactg 243
Query: 477 ataatatagcaactggacggtcgatgggtcaaggattggttgcggaggaggagatagaaa 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 244 ataatatagcaactggacggtcgatgggtcaaggattggttgcggaggaggagatagata 303
Query: 537 aagtactcaagcaggatgtcggagatgcagtgacagcaacagcaggcacggcagccgtcg 596
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 304 aagtactcaagcaggatgtcggagatgcagtgacagcaacagctggcacggcagctgtcg 363
Query: 597 ctg-cgtagcgtctggttctgtcactgtcagtacgggcgtgaacaccggttgtagtacta 655
||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 364 ctgccgtagcgtctggttctgtcactgtcagttcgggcgtgaactccggttgtagttcta 423
Query: 656 gatccggcgctatagacttggaaggttcttcgagccgacatggacttagtattgtaaggg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gatccggcgctatagacttggaaggttcttcgagccgacatggacttagtattgtaaggg 483
Query: 716 aagaggggcatttcaacgatacagaaattacagcattgagtggtgcattggctgggttct 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagaggggcatttcaacgatacagaaattacagcattgagtggtgcattggctgggttct 543
Query: 776 tggccggtgtcatcgtatgtccgttggatgttgccaagactaggttacaggctcaaggtt 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tggccggtgtcatcgtatgtccgttggatgttgccaagactaggttacaggctcaaggtt 603
Query: 836 tgcaacttaatggtccggtgactcgtccggtcggtagtgttgcta-cacgtttggaggga 894
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 604 tgcaacttaatggtccggtgactcgtccggtcggtagtgttgctaccacgtttggaggga 663
Query: 895 a 895
|
Sbjct: 664 a 664
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5740
Number of Sequences: 1807
Number of extensions: 5740
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)